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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891669.1_cds_XP_016446531.1_41376
CDS Infomation

[gene=LOC107771620] [db_xref=GeneID:107771620] [protein=protein piccolo-like isoform X4] [protein_id=XP_016446531.1] [location=join(14741..14908,16467..16602,17401..17538,18075..18212,18529..18666,18991..19128,19952..20101,20392..20435,20481..20577,20812..20919,21430..21539,21928..21999)] [gbkey=CDS]
Sequence

ATGGAAGAAAACTTAAACAACATCGAAGAAGAAGAAGAAGAAGATGAGGGCCCACCACCT
GGTTTTGATTCTTTAGCACATACCACCAATGATGAGACTGATGAAGATGAGGGCCCACCT
CCTGGTTGGCCCTCAAATCCTCAGCAACAAAATCAACAGCTTCTCCTGACTACTGATGTA
GAGATGGGGAGCAGAGAACACGAATCAGAAGACGATGAAGATGGTCCACCACCTGGGTGG
AACGCTGTAATCCCACAGAAAGATTCACCATCTACTTTACGAGGCACAGCAGCAGTTACT
TGTGATATAGAAATGGAGAAGAAAGAAGAAATCGTTGAAGATGAGGATAATGGTCCACCA
CCAGGATGGGAGTTGGCCCCTCAACTTCAGCCACTACAAACATCTACATCACCATCAGGG
ACACTACAAACTCTTCTTGCCGATATAGAAATGGAGAAGAAAGAGGAGGTCGTTGAAGAT
GAAGATAATGGTCCACCGCCAGGATGGGAGTTGACCCCTCAACTACAGCCACTACAAACG
TCTACACCACCATCAGGAACGCAACAAGCTCTACTTGCCGATACAGCAATGGAGAAGAAG
GGAGAAGTCGTTGAAGATGAAAATAATGGTCCACCACCAGGATGGCAGTTGACCCCTCAA
CTGCAGCCACTACAAACCTCTACACCACCATCAGGGACGCAACAAGCTCTTCTTGCTGAT
ATAAAAATGGAGAAGAAGGAAGAAGTCGCTGAAGATGAAGATAATGGTCCACCACCAGGA
TGGCAGTTGATCCCTCAACTACAGCCACTACAAACATCTACACCACCATTAGGGACACAG
CAAACTCTTCTTGCTGCATTAGCTTTTGTAGATGTTGAGATGGGGAGCAAACAGCAGTGT
GCAGTTGAAAAAGAAGGGCATCCACCGGGATCATCCATTCCTATGGCTGGACATTCATCA
CCACCTACACCACCACCTCAGTCATCATCATCAGTTGCTTCTTCTGAAATGGAGATGGGT
AGCAAACAAGAAGGCACAAAGAATGAGGAGGTAAGGCCCCCAATTGAAAAGCAACCTACA
TCGCATTTATCACGGATTAAACCTACAGCGCCTCAATCCTCATTACCTGCAACAACATCT
TCTGCCGAAATGGGTCAGATGGTTTGTGGTTCTTGCCGACAATTACTTACATATCCACAA
GGGGCTAAATTGGTGAAGTGTTCGTGCTGCCAGACTGTCAATTTTGTCCTGGAAGCTCAT
GAGGTTGGACAAGTTAAATGTGGGGGTTGTGCAGTGCTGCTCATGTACCCTTATGGGGCG
CCATCAGTTCGATGTTCCTCTTGTCGTCACATGACAAAAATTGGGGCACACAACAGACGA
CCTCCTCTCTCAGTACAACAGGCTCGAAGAAGACATCCTTCTTACCAAGTTCATTAG

Peptide Sequence

PEP ID

XP_016446531.1
PEP Infomation

PREDICTED: protein piccolo-like isoform X4 [Nicotiana tabacum]
Sequence

MEENLNNIEEEEEEDEGPPPGFDSLAHTTNDETDEDEGPPPGWPSNPQQQNQQLLLTTDV
EMGSREHESEDDEDGPPPGWNAVIPQKDSPSTLRGTAAVTCDIEMEKKEEIVEDEDNGPP
PGWELAPQLQPLQTSTSPSGTLQTLLADIEMEKKEEVVEDEDNGPPPGWELTPQLQPLQT
STPPSGTQQALLADTAMEKKGEVVEDENNGPPPGWQLTPQLQPLQTSTPPSGTQQALLAD
IKMEKKEEVAEDEDNGPPPGWQLIPQLQPLQTSTPPLGTQQTLLAALAFVDVEMGSKQQC
AVEKEGHPPGSSIPMAGHSSPPTPPPQSSSSVASSEMEMGSKQEGTKNEEVRPPIEKQPT
SHLSRIKPTAPQSSLPATTSSAEMGQMVCGSCRQLLTYPQGAKLVKCSCCQTVNFVLEAH
EVGQVKCGGCAVLLMYPYGAPSVRCSSCRHMTKIGAHNRRPPLSVQQARRRHPSYQVH

Transcript Sequence

Gene sequence data has not been registered.